User Tools

Site Tools


pipettetip_thermocycling_imaging

This is an old revision of the document!


Thermocycling and imaging pipette tips

LabAutobox controls the temperature of 2 thermo blocks which the pipettes move into afterwards they can be imaged. To show the concept, the tips are incubating for only 5 seconds per block in the video.

The code works something like this:

  1. First you need to set the thermo block heaters to the temperature range that you want to run the thermocycling (ie., 94C denaturation, 60 extension).
//heatblockstemp block1 60 block2 100
M104 T0 S60
M104 T1 S100
  1. Then you just assemble the macro steps to form the routine, it would look something like this for one cycle
//thermocycler_imaging
//motion heatblock1 zh 0 row 1 F3000
G1Z0F3000
G1X34Y198.5Z0F3000_6
G1Z32F2000
G1Z42F400_30
//motion heatblock2 zh 0 row 1 F3000
G1Z0F3000
G1X36Y248Z0F3000_5
G1Z32F2000_2
G1Z42F400_180
G1Z0F3000
//motion PCRcam zh 0 row 1 F3000
G1Z0F3000
G1X5.5Y83.5F3000
G1Z46F3000
//camsnap 192.168.1.89_09302020070456_pipetteimaging   400 70
snap 192.168.1.89_400_70_09302020070456_pipetteimaging
cycle 1  cycle 2  cycle 3  cycle 4  cycle 5  cycle 6 
| cycle 7 {{ :347_50_thcycl1124104newpic.png?200 | cycle 8  cycle 9  cycle 10  cycle 11
cycle 12  cycle 13  cycle 14  cycle 15
cycle 16
cycle 17  cycle 18  cycle 19  cycle 20  cycle 21
cycle 22  cycle 23  cycle 24  cycle 25  cycle 26
cycle 27  cycle 28  cycle 29  cycle 30  cycle 31
cycle 32
cycle 34  cycle 35  cycle 36
cycle 37  cycle 38  cycle 39  cycle 40  cycle 41
cycle 42  cycle 43  cycle 44  cycle 45
pipettetip_thermocycling_imaging.1604718464.txt.gz · Last modified: 2021/08/16 22:21 (external edit)